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BaseInfo

ncRNA ID novel_bra_miR709
Species Brassica rapa
Class miRNA
Genome position ChrA8:11765668-11765829 [+]
Reference genome Brapa_1.0
Source SRR1777714
Length 24
Mature sequence(if miRNA) 139 - AUAGAGUGAAUCAUUGGAGCAAAU - 162
Stem-loop(if miRNA) --                                                           A  AUA           CAA
  UUGCUCCAAUGGUUCACUCUAUAAUAGAGUUACUCUAUAAUAGAGUGAAAUAUAGAGUA UC   UUUUUUUACUC   A
  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||   |||||||||||
  AACGAGGUUACUAAGUGAGAUAUUAUCUCAAUGAGAUAUUAUCUCACUUUAUAUCUCAU AG   AAAAAAGUGAG   U
UA                                                           A  AAC           AUA
Stem-loop sequence UUGCUCCAAUGGUUCACUCUAUAAUAGAGUUACUCUAUAAUAGAGUGAAAUAUAGAGUAAUCAUAUUUUUUUACUCCAAAUAUAGAGUGAAAAAACAAGAAUACUCUAUAUUUCACUCUAUUAUAGAGUAACUCUAUUAUAGAGUGAAUCAUUGGAGCAAAU