ncRNA ID | novel_bra_miR709 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA8:11765668-11765829 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1777714 |
Length | 24 |
Mature sequence(if miRNA) | 139 - AUAGAGUGAAUCAUUGGAGCAAAU - 162 |
Stem-loop(if miRNA) |
--                                                           A  AUA           CAA   UUGCUCCAAUGGUUCACUCUAUAAUAGAGUUACUCUAUAAUAGAGUGAAAUAUAGAGUA UC   UUUUUUUACUC   A   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||   |||||||||||   AACGAGGUUACUAAGUGAGAUAUUAUCUCAAUGAGAUAUUAUCUCACUUUAUAUCUCAU AG   AAAAAAGUGAG   U UA                                                           A  AAC           AUA |
Stem-loop sequence | UUGCUCCAAUGGUUCACUCUAUAAUAGAGUUACUCUAUAAUAGAGUGAAAUAUAGAGUAAUCAUAUUUUUUUACUCCAAAUAUAGAGUGAAAAAACAAGAAUACUCUAUAUUUCACUCUAUUAUAGAGUAACUCUAUUAUAGAGUGAAUCAUUGGAGCAAAU |