ncRNA ID | novel_bra_miR708 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA7:8557918-8558065 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1777714 |
Length | 24 |
Mature sequence(if miRNA) | 125 - AUGGAACGAGGUUGGAGAUAAUUU - 148 |
Stem-loop(if miRNA) |
--AGC   A        A          -             GUAAUAAAA       -UUCUU        A           AUC CUAAUUUC UUCCAUAUUU AUUCUAAAAUAAA         AAAAUUA      UAAAUAAA UAAUAU      ||| |||||||| |||||||||| |||||||||||||         |||||||      |||||||| |||||U      UAG GGUUGGAG AAGGUAUAAA UAAGGUUUUAUUU         UUUUAAU      AUUUGUUU AUUAUU UUUAA   A        C          A             ------AAC       UUUAUU        -      |
Stem-loop sequence | AGCAUCACUAAUUUCAUUCCAUAUUUAUUCUAAAAUAAAGUAAUAAAAAAAAUUAUUCUUUAAAUAAAAUAAUAUUUUAUUAUUUGUUUAUUAUUUUAAUUUUCAAUUUAUUUUGGAAUAAAAUAUGGAACGAGGUUGGAGAUAAUUU |