ncRNA ID | novel_bra_miR701 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA6:15947378-15947513 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1777714 |
Length | 24 |
Mature sequence(if miRNA) | 113 - GAGGAAAAUUCAUUUCGUCGGAAU - 136 |
Stem-loop(if miRNA) |
--         AA      --          AUA   -A  -AAU        CAA            A  A   UCCGACGGA  AUGAAU  UCCUCGGAAU   CCG  GG    UUCCGAGG   UUCCGAGGAAAC CA A   |||||||||  ||||||  ||||||||||   |||  ||    ||||||||   |||||||||||| || A   AGGCUGCUU  UACUUA  AGGAGCCUUA   GGC  CC    AAGGCUCC   AAGGUUCCUUUG GU U UA         --      AA          --A   AG  AUAU        UUG            -  U |
Stem-loop sequence | UCCGACGGAAAAUGAAUUCCUCGGAAUAUACCGAGGAAUUUCCGAGGCAAUUCCGAGGAAACACAAAAUUUGGUUUCCUUGGAAGUUCCUCGGAAUAUACCGACGGAAUUCCGAGGAAAAUUCAUUUCGUCGGAAU |