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BaseInfo

ncRNA ID novel_bra_miR694
Species Brassica rapa
Class miRNA
Genome position ChrA3:20544107-20544168 [-]
Reference genome Brapa_1.0
Source SRR1777714;SRR1125021;SRR1485284
Length 24
Mature sequence(if miRNA) 39 - AUCCGAACCCGAACGGAUACCCGA - 62
Stem-loop(if miRNA) --                A        C CC
  AUCCGAACCCGAACGG UACCCGAA G  C
  |||||||||||||||| |||||||| |
  UAGGCUUGGGCUUGCC AUGGGCUU C  A
AC                C        C CC
Stem-loop sequence AUCCGAACCCGAACGGAUACCCGAACGCCCACCCCUUCGGGUACCCGUUCGGGUUCGGAUCA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_009138621.2
ncRNA:24   AGCCCAUAGGCAAGCCCAAGCCUA   1
  |||||||*||||||||||||||=|
targets:1018   UCGGGUACCCGUUCGGGUUCGGGU   1041

2.5 PREDICTED: Brassica rapa uncharacterized LOC103860940 (LOC103860940), mRNA uncharacterized LOC103860940(LOC103860940) coding protein psRNATarget
DQ886528.1
ncRNA:24   AGCCCAUA---GGCAAGCCCAAGCCUA   1
  ||||||||---||||||||||||||||
targets:33   UCGGGUAUUAUCCGUUCGGGUUCGGAU   59

3.0 Brassica rapa subsp. pekinensis acyl desaturase mRNA, complete cds NA coding protein psRNATarget