ncRNA ID | novel_bra_miR694 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA3:20544107-20544168 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1777714;SRR1125021;SRR1485284 |
Length | 24 |
Mature sequence(if miRNA) | 39 - AUCCGAACCCGAACGGAUACCCGA - 62 |
Stem-loop(if miRNA) |
--                A        C CC   AUCCGAACCCGAACGG UACCCGAA G  C   |||||||||||||||| |||||||| |   UAGGCUUGGGCUUGCC AUGGGCUU C  A AC                C        C CC |
Stem-loop sequence | AUCCGAACCCGAACGGAUACCCGAACGCCCACCCCUUCGGGUACCCGUUCGGGUUCGGAUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009138621.2 |
|
2.5 | PREDICTED: Brassica rapa uncharacterized LOC103860940 (LOC103860940), mRNA | uncharacterized LOC103860940(LOC103860940) | coding protein | psRNATarget | |||||||||
DQ886528.1 |
|
3.0 | Brassica rapa subsp. pekinensis acyl desaturase mRNA, complete cds | NA | coding protein | psRNATarget |