ncRNA ID | novel_bra_miR689 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA2:23513878-23514062 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1777714 |
Length | 24 |
Mature sequence(if miRNA) | 162 - ACAGAGGAAUAGGGUUACGACGGC - 185 |
Stem-loop(if miRNA) |
--                                                                                     CAUAU   CGUCGUAACCCUAUUCCUCUGUUGAGCUUAUAAUUGGAUGAUGAACCUAUAGGUUCACCCUAGGGGGUGAACCCAAGAAAAACUC     A   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     U   GCAGCAUUGGGAUAAGGAGACAACUCGAAUAUUAACCUACUACUUGGAUAUCCAAGUGGGAUCCCCCACUUGGGUUCUUUUUGAG     A CG                                                                                     CCCAA |
Stem-loop sequence | CGUCGUAACCCUAUUCCUCUGUUGAGCUUAUAAUUGGAUGAUGAACCUAUAGGUUCACCCUAGGGGGUGAACCCAAGAAAAACUCCAUAUAUAAACCCGAGUUUUUCUUGGGUUCACCCCCUAGGGUGAACCUAUAGGUUCAUCAUCCAAUUAUAAGCUCAACAGAGGAAUAGGGUUACGACGGC |