ncRNA ID | novel_bra_miR686 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA1:28151949-28152004 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1776899 |
Length | 24 |
Mature sequence(if miRNA) | 33 - AGAGGAAAAAAUGGAGUAGGGAUG - 56 |
Stem-loop(if miRNA) |
--            A  CA      UUC   UCUUUACUCCAU UU  CUUUUA   U   |||||||||||| ||  ||||||   AGGGAUGAGGUA AA  GGAGAU   A GU            A  AA      UUU |
Stem-loop sequence | UCUUUACUCCAUAUUCACUUUUAUUCUAUUUUAGAGGAAAAAAUGGAGUAGGGAUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009133654.2 |
|
2.5 | PREDICTED: Brassica rapa serine carboxypeptidase-like 47 (LOC103856543), mRNA | serine carboxypeptidase-like 47(LOC103856543) | coding protein | psRNATarget |