ncRNA ID | novel_bra_miR680 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA1:12071353-12071469 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1776899 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UAUUGGUUGGUGAACUUAGAGGUU - 24 |
Stem-loop(if miRNA) |
--                            CUAG        C           C  AA   UAUUGGUUGGUGAACUUAGAGGUUCACC    GGGUGAAC CAAGAAUAACU AU  U   ||||||||||||||||||||||||||||    |||||||| ||||||||||| ||   AUAACCAACCACUUGGAUUUCCAAGUGG    CCCACUUG GUUCUUAUUGA UA  U GA                            ACCA        A           -  AA |
Stem-loop sequence | UAUUGGUUGGUGAACUUAGAGGUUCACCCUAGGGGUGAACCCAAGAAUAACUCAUAAUUAAAUAGUUAUUCUUGAGUUCACCCACCAGGUGAACCUUUAGGUUCACCAACCAAUAAG |