| ncRNA ID | novel_bra_miR670 |
| Species | Brassica rapa |
| Class | miRNA |
| Genome position | ChrA5:2968378-2968551 [+] |
| Reference genome | Brapa_1.0 |
| Source | SRR1776899 |
| Length | 24 |
| Mature sequence(if miRNA) | 151 - AAGAUGGAUGAAGAAGAAGAAGGU - 174 |
| Stem-loop(if miRNA) |
-- - UU -------UCAUGCAG GAG AA UG --ACUUA UGAUUUGUUUAU CUUCUUCUUCUUC UU UUUUGU GAUUAU AUUUUU GAUUUCAU AU CUU U ||||||||||||| || |||||| |||||| |||||| |||||||| || ||| G GAAGAAGAAGAAG AG AGAACA CUAGUA UAGAGG CUGAAGUA UA AGA A UG U GU CUUUAAAUUUUCAGA -AA GA GU CUAAAAA AGAAGUCUAGGA |
| Stem-loop sequence | CUUCUUCUUCUUCUUUUUUUUGUUCAUGCAGGAUUAUGAGAUUUUUAAGAUUUCAUUGAUACUUACUUUGAUUUGUUUAUUGAAGGAUCUGAAGAAGAAAAAAUCAUUGAUGAAGUCAGGGAGAUAAAUGAUCAGACUUUUAAAUUUCACAAGAUGGAUGAAGAAGAAGAAGGU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_009105532.2 |
|
2.5 | PREDICTED: Brassica rapa type 2 DNA topoisomerase 6 subunit B-like (LOC103829835), transcript variant X1, mRNA | type 2 DNA topoisomerase 6 subunit B-like(LOC103829835) | coding protein | psRNATarget | |||||||||
| XM_009105535.2 |
|
2.5 | PREDICTED: Brassica rapa type 2 DNA topoisomerase 6 subunit B-like (LOC103829835), transcript variant X2, mRNA | type 2 DNA topoisomerase 6 subunit B-like(LOC103829835) | coding protein | psRNATarget |