ncRNA ID | novel_bra_miR668 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA5:11244241-11244362 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1776899 |
Length | 24 |
Mature sequence(if miRNA) | 1 - ACGUAAAAUAUUUCGUCGUAAAGA - 24 |
Stem-loop(if miRNA) |
--   -        -             ACUCGCG     U                    U   ACG UAAAAUAU UUCGUCGUAAAGA       AAAUU ACGUGGCUUUUACGAGGAAA A   ||| |||||||| |||||||||||||       ||||| |||||||||||||||||||| G   UGC GUUUUGUA AAGCAGCAUUUCU       UUUAA UGCACCGAAAAUGCUCCUUU U AU   U        U             -GCUACA     C                    U |
Stem-loop sequence | ACGUAAAAUAUUUCGUCGUAAAGAACUCGCGAAAUUUACGUGGCUUUUACGAGGAAAUAGUUUUUCCUCGUAAAAGCCACGUCAAUUUACAUCGUCUUUACGACGAAUAUGUUUUGUCGUUA |