ncRNA ID | novel_bra_miR666 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA4:2035294-2035428 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1776899 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AACUAAUAGUUGGCUGCGCGAAAU - 24 |
Stem-loop(if miRNA) |
--       AG   GC  C         A  AC      GUC   CA    CU   G       AAA   AACUAAU  UUG  UG GCGAAAUUG GA  AUAAUA   AAC  UUAA  AAU AACGGAA   U   |||||||  |||  || ||||||||| ||  ||||||   |||  ||||  ||| |||||||   A   UUGAUUA  GAC  AC CGUUUUGAU CU  UAUUAU   UUG  AAUU  UUA UUGCUUU   A AA       GU   UU  A         A  AA      AAA   AC    UU   A       GGC |
Stem-loop sequence | AACUAAUAGUUGGCUGCGCGAAAUUGAGAACAUAAUAGUCAACCAUUAACUAAUGAACGGAAAAAUAACGGUUUCGUUAAUUUUUUAACAGUUAAAUAUUAUAAUCAUAGUUUUGCACAUUCAGUGAUUAGUUAA |