ncRNA ID | novel_bra_miR664 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA3:5714067-5714145 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1776899 |
Length | 24 |
Mature sequence(if miRNA) | 56 - AGAGGAAAAUAUAGAGGAAAGUUA - 79 |
Stem-loop(if miRNA) |
---  A              AAA       U UG      U    AG GGAAAAUAUAGAGG   GUUAUUU U  CCUCUA A    || ||||||||||||||   ||||||| |  ||||||    UC CCUUUUAUAUCUCU   CAAUAAA A  GGAGAU U AAU  -              AUA       - GU      U |
Stem-loop sequence | AGAGGAAAAUAUAGAGGAAAGUUAUUUUUUGCCUCUAUAUUUAGAGGUGAAAAUAACAUAUCUCUAUAUUUUCCCUUAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009138223.1 |
|
3.0 | PREDICTED: Brassica rapa NAC domain-containing protein 100 (LOC103860593), mRNA | NAC domain-containing protein 100(LOC103860593) | coding protein | psRNATarget |