| ncRNA ID | novel_bra_miR660 |
| Species | Brassica rapa |
| Class | miRNA |
| Genome position | ChrA1:11984475-11984565 [-] |
| Reference genome | Brapa_1.0 |
| Source | SRR1776889 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AGAGUAGAAAAUAGAGUGAUAAAC - 24 |
| Stem-loop(if miRNA) |
--GGU ACCA CAU UCACUCUAUUUUUUACUCUAAAAUAGAGU UUGGAG U ||||||||||||||||||||||||||||| |||||| C AGUGAGAUAAAAGAUGAGAUUUUAUCUCA AAUCUC U CAAAU ---- AUU |
| Stem-loop sequence | GGUUCACUCUAUUUUUUACUCUAAAAUAGAGUACCAUUGGAGCAUUCUUUACUCUAAACUCUAUUUUAGAGUAGAAAAUAGAGUGAUAAAC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_018655384.1 |
|
3.0 | PREDICTED: Brassica rapa protein PNS1 (LOC103845896), mRNA | NA | coding protein | psRNATarget | |||||||||
| XM_009135379.2 |
|
3.0 | PREDICTED: Brassica rapa something about silencing protein 10 (LOC103858087), mRNA | something about silencing protein 10(LOC103858087) | coding protein | psRNATarget |