ncRNA ID | novel_bra_miR657 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA10:6698997-6699106 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1776889 |
Length | 24 |
Mature sequence(if miRNA) | 87 - AUGAGAUAUGGUAGAUGUUUAAUA - 110 |
Stem-loop(if miRNA) |
--      C UC        G   GAA    A   UAAA         A    A GUA   UUAAAU U  AUCAUAUU UUA   AAUA GUU    AUAAUAAAU UUAA C   A   |||||| |  |||||||| |||   |||| |||    ||||||||| |||| |   AAUUUG A  UGGUAUAG AGU   UUAU CAA    UAUUGUUUG AAUU G   C AU      U GA        -   --A    C   --UA         A    - AAA |
Stem-loop sequence | UUAAAUCUUCAUCAUAUUGUUAGAAAAUAAGUUUAAAAUAAUAAAUAUUAAACGUAACAAAGUUAAAGUUUGUUAUAUAACCUAUUAUGAGAUAUGGUAGAUGUUUAAUA |