| ncRNA ID | novel_bra_miR656 |
| Species | Brassica rapa |
| Class | miRNA |
| Genome position | ChrA1:17169308-17169418 [+] |
| Reference genome | Brapa_1.0 |
| Source | SRR1776889 |
| Length | 21 |
| Mature sequence(if miRNA) | 1 - UCAACAAAGCUAAAGAUCUCA - 21 |
| Stem-loop(if miRNA) |
-- A A AC UUUGUUGAAAUAUCUC UCAACAAAGCUAA GAUCUCAAGAAAAAAAAA GA U A ||||||||||||| |||||||||||||||||| || | AGUUGUUUCGAUU CUAGGGUUCUUUUUUUUU CU C A AA G - AA ACAAGAAAAAAAAAAG |
| Stem-loop sequence | UCAACAAAGCUAAAGAUCUCAAGAAAAAAAAAAGAACUUUUGUUGAAAUAUCUCAAGAAAAAAAAAAGAACACAAUCUUUUUUUUUCUUGGGAUCGUUAGCUUUGUUGAAA |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_009151040.2 |
|
3.0 | PREDICTED: Brassica rapa pentatricopeptide repeat-containing protein At1g18485 (LOC103872608), mRNA | pentatricopeptide repeat-containing protein At1g18485(LOC103872608) | coding protein | psRNATarget | |||||||||
| XM_009114460.2 |
|
3.0 | PREDICTED: Brassica rapa 4-coumarate--CoA ligase-like 1 (LOC103838045), mRNA | 4-coumarate--CoA ligase-like 1(LOC103838045) | coding protein | psRNATarget |