ncRNA ID | ath-miRf10777-npr |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 23 |
Mature sequence(if miRNA) | NA - UGGUGAUGUCUUCUACUCGACCU - NA |
Stem-loop(if miRNA) |
      - AG    G   U -UU          UG          -----------     C GAGGUG A  UGGU AUG C   CUACUCGACC  GGGGUCGAGU           GAUCU U |||||| |  |||| ||| |   ||||||||||  ||||||||||           ||||| CUUCGC U  ACUA UAC G   GGUGAGCUGG  CUCCAGCUCA           CUAGA U       C GG    G   U UUU          GU          UCCUCGAAGCU     G |
Stem-loop sequence | GAGGUGAAGUGGUGAUGUCUUCUACUCGACCUGGGGGUCGAGUGAUCUCUUGAGAUCUCGAAGCUCCUACUCGACCUCUGGGUCGAGUGGUUUGUCAUGAUCAGGUCCGCUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EF183194.1 |
|
0.0 | Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence | NA | coding protein | psRNATarget | |||||||||
NM_103391.1 |
|
1.5 | Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA | DNAse I-like superfamily protein(AT1G40390) | coding protein | psRNATarget |