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BaseInfo

ncRNA ID novel_bra_miR654
Species Brassica rapa
Class miRNA
Genome position ChrA9:6063799-6063871 [+]
Reference genome Brapa_1.0
Source SRR1776889;SRR1776899;SRR1777714
Length 24
Mature sequence(if miRNA) 50 - AUACAUGUAUUUUAAGAACCUAGG - 73
Stem-loop(if miRNA) --UAU                              A
     GUUCUUAAAAUACAUGUAUGUAUAUAUAUA U
     |||||||||||||||||||||||||||||| A
     CAAGAAUUUUAUGUACAUACAUAUAUAUAU U
GGAUC                              A
Stem-loop sequence UAUGUUCUUAAAAUACAUGUAUGUAUAUAUAUAAUAUAUAUAUAUAUACAUACAUGUAUUUUAAGAACCUAGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_009140216.2
ncRNA:24   GGAUCCAAGAAUUUUAUGUACAUA   1
  ||*|*||*|||||||*||||||||
targets:530   CCCAAGUACUUAAAAAACAUGUAU   553

2.5 PREDICTED: Brassica rapa methylesterase 9-like (LOC103862513), mRNA methylesterase 9-like(LOC103862513) coding protein psRNATarget