ncRNA ID | novel_bra_miR654 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA9:6063799-6063871 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1776889;SRR1776899;SRR1777714 |
Length | 24 |
Mature sequence(if miRNA) | 50 - AUACAUGUAUUUUAAGAACCUAGG - 73 |
Stem-loop(if miRNA) |
--UAU                              A      GUUCUUAAAAUACAUGUAUGUAUAUAUAUA U      |||||||||||||||||||||||||||||| A      CAAGAAUUUUAUGUACAUACAUAUAUAUAU U GGAUC                              A |
Stem-loop sequence | UAUGUUCUUAAAAUACAUGUAUGUAUAUAUAUAAUAUAUAUAUAUAUACAUACAUGUAUUUUAAGAACCUAGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009140216.2 |
|
2.5 | PREDICTED: Brassica rapa methylesterase 9-like (LOC103862513), mRNA | methylesterase 9-like(LOC103862513) | coding protein | psRNATarget |