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BaseInfo

ncRNA ID novel_bra_miR652
Species Brassica rapa
Class miRNA
Genome position ChrA9:33422731-33422838 [+]
Reference genome Brapa_1.0
Source SRR1776889
Length 24
Mature sequence(if miRNA) 85 - AGUGGAAAAUAGAGUAGGGUUGGA - 108
Stem-loop(if miRNA) --      A       A CU    CC       --   UU  UCCAU       G
  CAACUC AUUCUAU U  CACU  AUAAUGA  AAU  AU     AAAUGGA U
  |||||| ||||||| |  ||||  |||||||  |||  ||     |||||||
  GUUGGG UGAGAUA A  GUGA  UAUUACU  UUG  UG     UUUAUCU A
AG      A       A AG    AA       AC   UU  UUUUU       A
Stem-loop sequence CAACUCAAUUCUAUAUCUCACUCCAUAAUGAAAUUUAUUCCAUAAAUGGAGUAAUCUAUUUUUUUUGUUUGUUCAUCAUUAUAAAGUGGAAAAUAGAGUAGGGUUGGA