ncRNA ID | novel_bra_miR652 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA9:33422731-33422838 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1776889 |
Length | 24 |
Mature sequence(if miRNA) | 85 - AGUGGAAAAUAGAGUAGGGUUGGA - 108 |
Stem-loop(if miRNA) |
--      A       A CU    CC       --   UU  UCCAU       G   CAACUC AUUCUAU U  CACU  AUAAUGA  AAU  AU     AAAUGGA U   |||||| ||||||| |  ||||  |||||||  |||  ||     |||||||   GUUGGG UGAGAUA A  GUGA  UAUUACU  UUG  UG     UUUAUCU A AG      A       A AG    AA       AC   UU  UUUUU       A |
Stem-loop sequence | CAACUCAAUUCUAUAUCUCACUCCAUAAUGAAAUUUAUUCCAUAAAUGGAGUAAUCUAUUUUUUUUGUUUGUUCAUCAUUAUAAAGUGGAAAAUAGAGUAGGGUUGGA |