ncRNA ID | novel_bra_miR649 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA9:562309-562364 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1776889;SRR1776899 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGAGGAAAAAAUGGAGUAGGGAUG - 24 |
Stem-loop(if miRNA) |
--       G    A   A      CAC   UCCUUAC CCAU UUU CUUUUA   C   ||||||| |||| ||| ||||||   AGGGAUG GGUA AAA GGAGAU   A GU       A    A   A      UUU |
Stem-loop sequence | UCCUUACGCCAUAUUUACUUUUACACCAUUUUAGAGGAAAAAAUGGAGUAGGGAUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009133654.2 |
|
2.5 | PREDICTED: Brassica rapa serine carboxypeptidase-like 47 (LOC103856543), mRNA | serine carboxypeptidase-like 47(LOC103856543) | coding protein | psRNATarget |