ncRNA ID | novel_bra_miR644 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA8:12245574-12245737 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1776889 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UCCGGUUUUGGCGAGAAAAUGCAU - 24 |
Stem-loop(if miRNA) |
--             UUU                    -    -UC G         AU      UA G UU  G CG    A   GCAUUUUUUCGUU   GCUGGGAAAAUGUGUUUUUC GGUU   G UGGAAAAAU  CAUUUU  C G  UU G  GAAA U   |||||||||||||   |||||||||||||||||||| ||||   | |||||||||  ||||||  | |  || |  |||| A   CGUAAAAGAGCGG   UGGCCUUUUUACGUAAAAGG CCGG   U ACCUUUUUG  GUAAAG  G U  GG U  UUUU C UA             UUU                    G    UUU G         -C      GC G UU  G AU    G |
Stem-loop sequence | GCAUUUUUUCGUUUUUGCUGGGAAAAUGUGUUUUUCGGUUUCGGUGGAAAAAUAUCAUUUUUACGGUUUUGGCGGAAAAUACGUUUUUAUGGGUUUGGCGGAAAUGCGUUUUUCCAGUUUUGGCCGGGAAAAUGCAUUUUUCCGGUUUUGGCGAGAAAAUGCAU |