ncRNA ID | novel_bra_miR643 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA8:9573219-9573344 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1776889 |
Length | 24 |
Mature sequence(if miRNA) | 103 - AAGAGACGGUUCUUAUAUUACGCU - 126 |
Stem-loop(if miRNA) |
--CU                       -       A      C   A  - C    C     AC     UAAUAUAAGAACUGUUUCUUAAC UUUAACU AAAAAA UAA AA C GUUU UUAAA  U     ||||||||||||||||||||||| ||||||| |||||| ||| || | |||| |||||  C     AUUAUAUUCUUGGCAGAGAAUUG AAAUUGA UUUUUU AUU UU G CGAA AAUUU  U UCGC                       U       A      A   C  A U    -     AU |
Stem-loop sequence | CUUAAUAUAAGAACUGUUUCUUAACUUUAACUAAAAAAACUAAAAACCGUUUCUUAAAACUCUUAUUUAAAAGCUGAUUCUUAAUUUUUUAAGUUAAAUGUUAAGAGACGGUUCUUAUAUUACGCU |