| ncRNA ID | novel_bra_miR640 |
| Species | Brassica rapa |
| Class | miRNA |
| Genome position | ChrA7:19528840-19529025 [-] |
| Reference genome | Brapa_1.0 |
| Source | SRR1776889 |
| Length | 24 |
| Mature sequence(if miRNA) | 1 - AAUAUGGAGUGAAGUUGAAGAUGU - 24 |
| Stem-loop(if miRNA) |
-- C C C -- AA A U A AA U AUCU CAAUU UAUUUUAUAUUUUACU CAAAAUUAAAAAA AUGAAGUG AAAUG AGUG UGAAC AAAAAUAAAA AUUACUCUA A |||| ||||| |||||||||||||||| ||||||||||||| |||||||| ||||| |||| ||||| |||||||||| ||||||||| UAGA GUUGA GUGAGGUAUAAAAUGA GUUUUAAUUUUUU UACUUCAC UUUAU UCAU ACUUG UUUUUAUUUU UAAUGAGGU A UG A A U UU CC C U A CA A |
| Stem-loop sequence | AUCUCCAAUUCUAUUUUAUAUUUUACUCCAAAAUUAAAAAAAUGAAGUGAAAAAUGAAGUGUUGAACAAAAAAUAAAAAAAUUACUCUAUAAAUGGAGUAAUACUUUUAUUUUUAGUUCAUUACUCUAUUUCCCACUUCAUUUUUUUUUAAUUUUGUAGUAAAAUAUGGAGUGAAGUUGAAGAUGU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_018654247.1 |
|
3.0 | PREDICTED: Brassica rapa putative leucine-rich repeat receptor-like serine/threonine-protein kinase At3g53590 (LOC103841285), mRNA | NA | coding protein | psRNATarget |