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BaseInfo

ncRNA ID novel_bra_miR638
Species Brassica rapa
Class miRNA
Genome position ChrA7:7796117-7796280 [+]
Reference genome Brapa_1.0
Source SRR1776889
Length 24
Mature sequence(if miRNA) 141 - UCCGGUUUUGGCGAGAAAAUGCAU - 164
Stem-loop(if miRNA) --             UUU                    -    -UC G         AU      UA G UU  G CG    A
  GCAUUUUUUCGUU   GCUGGGAAAAUGUGUUUUUC GGUU   G UGGAAAAAU  CAUUUU  C G  UU G  GAAA U
  |||||||||||||   |||||||||||||||||||| ||||   | |||||||||  ||||||  | |  || |  |||| A
  CGUAAAAGAGCGG   UGGCCUUUUUACGUAAAAGG CCGG   U ACCUUUUUG  GUAAAG  G U  GG U  UUUU C
UA             UUU                    G    UUU G         -C      GC G UU  G AU    G
Stem-loop sequence GCAUUUUUUCGUUUUUGCUGGGAAAAUGUGUUUUUCGGUUUCGGUGGAAAAAUAUCAUUUUUACGGUUUUGGCGGAAAAUACGUUUUUAUGGGUUUGGCGGAAAUGCGUUUUUCCAGUUUUGGCCGGGAAAAUGCAUUUUUCCGGUUUUGGCGAGAAAAUGCAU