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BaseInfo

ncRNA ID	novel_bra_miR635
Species	Brassica rapa
Class	miRNA
Genome position	ChrA6:25874963-25875020 [-]
Reference genome	Brapa_1.0
Source	SRR1776889
Length	24
Mature sequence(if miRNA)	1 - AUAAGAAAAAGAAAUCGAGGCUGC - 24
Stem-loop(if miRNA)	--U                U      AAG    GUCUCGGUUUCUUUUU CUUAUA   A    |||||||||||||||| ||||||   U    CGGAGCUAAAGAAAAA GAAUAU   U CGU                -      ACU
Stem-loop sequence	UGUCUCGGUUUCUUUUUUCUUAUAAAGAUUUCAUAUAAGAAAAAGAAAUCGAGGCUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_009148202.2	ncRNA:24   CGUCGGAGCUAAAGAAAAAGAAUA   1   *|**|||||*|||||||||||||* targets:95   UCUUCCUCGUUUUCUUUUUCUUAC   118 Target Full Sequence	2.0	PREDICTED: Brassica rapa NAC domain-containing protein 76 (LOC103870065), mRNA	NAC domain-containing protein 76(LOC103870065)	coding protein	psRNATarget
XM_009114194.2	ncRNA:24   CGUCGGAGCUAAAGAAAAAGAAUA   1   *=**=||=||||||||||||||=| targets:479   AUUUUCUUGAUUUCUUUUUCUUGU   502 Target Full Sequence	2.5	PREDICTED: Brassica rapa RPM1-interacting protein 4-like (LOC103837815), mRNA	RPM1-interacting protein 4-like(LOC103837815)	coding protein	psRNATarget
XM_018657498.1	ncRNA:24   CGUCGGAGCUAAAGAAAAAGAAUA   1   *|=*|||*||||||||*||||||| targets:2433   ACGCCCUGGAUUUCUUCUUCUUAU   2456 Target Full Sequence	2.5	PREDICTED: Brassica rapa ATPase 6, plasma membrane-type (LOC103860344), mRNA	NA	coding protein	psRNATarget
XM_009147066.2	ncRNA:24   CGUC---GGAGCUAAAGAAAAAGAAUA   1   *|||---|=|=*||||||||||||||| targets:310   UCAGUUACUUUCAUUUCUUUUUCUUAU   336 Target Full Sequence	3.0	PREDICTED: Brassica rapa protein MARD1-like (LOC103869027), transcript variant X2, mRNA	protein MARD1-like(LOC103869027)	coding protein	psRNATarget
XM_009147065.2	ncRNA:24   CGUC---GGAGCUAAAGAAAAAGAAUA   1   *|||---|=|=*||||||||||||||| targets:306   UCAGUUACUUUCAUUUCUUUUUCUUAU   332 Target Full Sequence	3.0	PREDICTED: Brassica rapa protein MARD1-like (LOC103869027), transcript variant X1, mRNA	protein MARD1-like(LOC103869027)	coding protein	psRNATarget