ncRNA ID | ath-miR5014b |
Species | Arabidopsis thaliana |
Class | miRNA |
Genome position | chr1:24605427-24605567 [-] |
Reference genome | TAIR10 |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | 101 - AUUUGUACACCUAGAUCUGUA - 121 |
Stem-loop(if miRNA) |
UAGUCACUUUUC                  C               C     U            A  ----    G             ACUGUUUGAUUUGUACAC UAGAUCUGUACAACA UUUUA UGUACAGAUGUA GU    GUAC U             |||||||||||||||||| ||||||||||||||| ||||| |||||||||||| ||    |||| U             UGACAAACUAAACAUGUG AUCUAGACAUGUUGU AAAAU ACAUGUUUACAU UA    UAUG G ------------                  A               A     C            A  UUUU    U |
Stem-loop sequence | UAGUCACUUUUCACUGUUUGAUUUGUACACCUAGAUCUGUACAACACUUUUAUUGUACAGAUGUAAGUGUACGUUGUGUAUUUUUAUAUACAUUUGUACACUAAAAAUGUUGUACAGAUCUAAGUGUACAAAUCAAACAGU |
1 | PMID:22221297
"Global analysis of non-coding small RNAs in Arabidopsis in response to jasmonate treatment by deep sequencing technology"; Zhang B, Xie D, Jin Z; J Integr Plant Biol. 54:73-86(2012). |