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BaseInfo

ncRNA ID ath-miR5014b
Species Arabidopsis thaliana
Class miRNA
Genome position chr1:24605427-24605567 [-]
Reference genome TAIR10
Source miRBase
Length 21
Mature sequence(if miRNA) 101 - AUUUGUACACCUAGAUCUGUA - 121
Stem-loop(if miRNA) UAGUCACUUUUC                  C               C     U            A  ----    G
            ACUGUUUGAUUUGUACAC UAGAUCUGUACAACA UUUUA UGUACAGAUGUA GU    GUAC U
            |||||||||||||||||| ||||||||||||||| ||||| |||||||||||| ||    |||| U
            UGACAAACUAAACAUGUG AUCUAGACAUGUUGU AAAAU ACAUGUUUACAU UA    UAUG G
------------                  A               A     C            A  UUUU    U
Stem-loop sequence UAGUCACUUUUCACUGUUUGAUUUGUACACCUAGAUCUGUACAACACUUUUAUUGUACAGAUGUAAGUGUACGUUGUGUAUUUUUAUAUACAUUUGUACACUAAAAAUGUUGUACAGAUCUAAGUGUACAAAUCAAACAGU

Reference

1 PMID:22221297
"Global analysis of non-coding small RNAs in Arabidopsis in response to jasmonate treatment by deep sequencing technology";
Zhang B, Xie D, Jin Z;
J Integr Plant Biol. 54:73-86(2012).