ncRNA ID | novel_bra_miR629 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA5:11413224-11413359 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1776889;SRR1777714 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GAAGAAUUCAUUUUCCGUCGGAAC - 24 |
Stem-loop(if miRNA) |
--       --           CC       --U   UC     A        A              -  A   UCCGACG  AGAUGAAUUUU  UCGGAAU   CCG  GGAAU UUCCGAGG AAUUCCGAGGAAGC CA A   |||||||  |||||||||||  |||||||   |||  ||||| |||||||| |||||||||||||| || U   AGGCUGC  UUUACUUAAGA  AGCCUUA   GGC  CCUUA AAGGCUCC UUAAGGCUUCUUUG GU U CA       CU           --       UAU   -U     -        G              U  U |
Stem-loop sequence | UCCGACGAGAUGAAUUUUCCUCGGAAUUCCGUCGGAAUAUUCCGAGGAAAUUCCGAGGAAGCCAAAUUUUGUGUUUCUUCGGAAUUGCCUCGGAAAUUCCUCGGUAUAUUCCGAAGAAUUCAUUUUCCGUCGGAAC |