ncRNA ID | novel_bra_miR616 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA3:17321854-17321901 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1776889 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGUAGAAAAUGGAGUAGGGUUGGA - 24 |
Stem-loop(if miRNA) |
--   A                     AGU GAAAAUGGAGUAGGGUUGG   ||| ||||||||||||||||||A   UCA CUUUUAUCUCAUUUUAACG UU   -                   |
Stem-loop sequence | AGUAGAAAAUGGAGUAGGGUUGGAGCAAUUUUACUCUAUUUUCACUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009104547.2 |
|
2.5 | PREDICTED: Brassica rapa F-box protein At1g30790-like (LOC103828913), mRNA | F-box protein At1g30790-like(LOC103828913) | coding protein | psRNATarget |