ncRNA ID | novel_bra_miR614 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA2:20126037-20126170 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1776889;SRR1776899 |
Length | 24 |
Mature sequence(if miRNA) | 111 - AGAGGAACUCUAUUAUAGAUGCAU - 134 |
Stem-loop(if miRNA) |
--                    A     --U  A            GGAAAA   C         C  U   GCAUCUAUAAUAGAGUUCUU UAUUU   AG GGAAAAUAUAGA      UUA UUUUUGCCU UA A   |||||||||||||||||||| |||||   || ||||||||||||      ||| ||||||||| ||   CGUAGAUAUUAUCUCAAGGA AUAAA   UC CCUUUUAUAUCU      AAU AGAAAUGGA AU U UA                    G     UAU  -            AUAUAC   -         A  U |
Stem-loop sequence | GCAUCUAUAAUAGAGUUCUUAUAUUUUAGAGGAAAAUAUAGAGGAAAAUUACUUUUUGCCUCUAUAUUUAAAGGUAAAGAUAACAUAUAUCUAUAUUUUCCCUUAUAAAUAGAGGAACUCUAUUAUAGAUGCAU |