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BaseInfo

ncRNA ID novel_bra_miR613
Species Brassica rapa
Class miRNA
Genome position ChrA10:836328-836516 [+]
Reference genome Brapa_1.0
Source SRR1776889
Length 24
Mature sequence(if miRNA) 166 - AUCUUUGGGCUUAUUGGCGAAAUA - 189
Stem-loop(if miRNA) --    AU        UA     GCUU    GACGA    GAGAGUGGUUUCAGCGGUGGGUUAGUGUGAUUCAAUCGGUGGGUUUAGAAUUUUCA
  UUUC  CAGUGGGU  GAGGA    AAUC     GAGA                                                        U
  ||||  ||||||||  |||||    ||||     ||||                                                        U
  AAAG  GUUAUUCG  UUUCU    UUAG     UGUU                                                        G
AU    CG        GG     -AUU    ---AG    AGUCAACGAUUUUUUUUUUUUAGAGUGUUAGUGUUUGGUGUUUAGGGAUUAGGAGA
Stem-loop sequence UUUCAUCAGUGGGUUAGAGGAGCUUAAUCGACGAGAGAGAGAGUGGUUUCAGCGGUGGGUUAGUGUGAUUCAAUCGGUGGGUUUAGAAUUUUCAUUGAGAGGAUUAGGGAUUUGUGGUUUGUGAUUGUGAGAUUUUUUUUUUUUAGCAACUGAUUGUGAGAUUUUAUCUUUGGGCUUAUUGGCGAAAUA