ncRNA ID | novel_bra_miR611 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA2:1472082-1472180 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1776880;SRR1776899 |
Length | 24 |
Mature sequence(if miRNA) | 76 - ACUCUUUUUGUUUGUCGGAAUUUC - 99 |
Stem-loop(if miRNA) |
--AAUG       -   -U     UU           C         --          CCGACGA CGA  AGAGU  UCCUCGGAAUU CCUCGGAAU  UCCC       ||||||| |||  |||||  ||||||||||| |||||||||  |||U       GGCUGUU GUU  UCUCA  AGGAGCCUUAA GGAGCCUUA  AGGC CUUUAA       U   UU     --           A         AA    |
Stem-loop sequence | AAUGCCGACGACGAUAGAGUUUUCCUCGGAAUUCCCUCGGAAUUCCCUCGGAAAAUUCCGAGGAAAUUCCGAGGAACUCUUUUUGUUUGUCGGAAUUUC |