ncRNA ID | novel_bra_miR607 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA10:8875083-8875162 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1776880 |
Length | 21 |
Mature sequence(if miRNA) | 1 - GCAGCAUCAUUAAGAUUCACA - 21 |
Stem-loop(if miRNA) |
--                  A  --A      U    UCCU   GCAGCAUCAUUAAGAUUC CA   GAGAUG GCUU    U   |||||||||||||||||| ||   |||||| ||||   CGUCGUAGUAGUUCUAAG GU   CUUUGC CGGG    U UA                  G  AAG      U    UUUG |
Stem-loop sequence | GCAGCAUCAUUAAGAUUCACAAGAGAUGUGCUUUCCUUUGUUUGGGCUCGUUUCGAAUGGGAAUCUUGAUGAUGCUGCAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009128446.2 |
|
2.5 | PREDICTED: Brassica rapa uncharacterized LOC103851575 (LOC103851575), mRNA | uncharacterized LOC103851575(LOC103851575) | coding protein | psRNATarget |