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BaseInfo

ncRNA ID novel_bra_miR607
Species Brassica rapa
Class miRNA
Genome position ChrA10:8875083-8875162 [+]
Reference genome Brapa_1.0
Source SRR1776880
Length 21
Mature sequence(if miRNA) 1 - GCAGCAUCAUUAAGAUUCACA - 21
Stem-loop(if miRNA) --                  A  --A      U    UCCU
  GCAGCAUCAUUAAGAUUC CA   GAGAUG GCUU    U
  |||||||||||||||||| ||   |||||| ||||
  CGUCGUAGUAGUUCUAAG GU   CUUUGC CGGG    U
UA                  G  AAG      U    UUUG
Stem-loop sequence GCAGCAUCAUUAAGAUUCACAAGAGAUGUGCUUUCCUUUGUUUGGGCUCGUUUCGAAUGGGAAUCUUGAUGAUGCUGCAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_009128446.2
ncRNA:21   ACACUUAGAAUUACUACGACG   1
  ||*|||||||=||||||||||
targets:137   UGGGAAUCUUGAUGAUGCUGC   157

2.5 PREDICTED: Brassica rapa uncharacterized LOC103851575 (LOC103851575), mRNA uncharacterized LOC103851575(LOC103851575) coding protein psRNATarget