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BaseInfo

ncRNA ID	ath-miRf10772-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - CUCGACCUCGGGGUCGAGUGGUG - NA
Stem-loop(if miRNA)	UG --          C            UG   GAA UG U   G  ----CU          U AUGA  G  CACUCGACCU GGGGUCGAGUGG  GUU   U  G GAU UC      CUACUCGACC G ||||  |  |||||||||| ||||||||||||  |||   |  | ||| ||      |||||||||| UACU  U  GUGAGCUGGG CUCCAGCUCAUC  CGA   A  U CUA AG      GGUGAGCUGG U     GU UG          U            CU   --- GU -   G  UUCUCU          U
Stem-loop sequence	AUGAUGGCACUCGACCUCGGGGUCGAGUGGUGGUUGAAUUGGUGAUGUCCUCUACUCGACCUGUUGGUCGAGUGGUCUCUUGAGAUCUUGAAGCUCCUACUCGACCUCUGGGUCGAGUGGUUUGUCAU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY227642.1	ncRNA:23   GUGGUGAGCUGGGGCUCCAGCUC   1   ||||||||||||||||||||||| targets:852   CACCACUCGACCCCGAGGUCGAG   874 Target Full Sequence	0.0	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
EF183042.1	ncRNA:23   GUGGUGAGCUGGGGCUCCAGCUC   1   ||=|||||||||||||||||||| targets:1615   CAUCACUCGACCCCGAGGUCGAG   1637 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:23   GUGGUGAGCUGGGGCUCCAGCUC   1   *|*|||||||||||||||||||* targets:1057   AAGCACUCGACCCCGAGGUCGAC   1079 Target Full Sequence	1.0	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
AY227642.1	ncRNA:23   GUGGUGAGCUGGGGCUCCAGCUC   1   *||||||||||||*||||||||| targets:761   AACCACUCGACCCAGAGGUCGAG   783 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
EF183042.1	ncRNA:23   GUGGUGAGCUGGGGCUCCAGCUC   1   *|||||||||||*|||||||||| targets:1524   AACCACUCGACCACGAGGUCGAG   1546 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:23   GUGGUGAGCUGGGGCUCCAGCUC   1   ||||||||||||*|||||||||| targets:1148   CACCACUCGACCACGAGGUCGAG   1170 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
NM_103391.1	ncRNA:23   GUGGUGAGCUGGGGCUCCAGCUC   1   *|||||||||||||*|||||||| targets:1102   GACCACUCGACCCCCAGGUCGAG   1124 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
NM_103391.1	ncRNA:23   GUGGUGAGCUGGGGCUCCAGCUC   1   *||||||||||||||*||||||| targets:1207   AACCACUCGACCCCGUGGUCGAG   1229 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
AY231407.1	ncRNA:23   GUGGUGAGCUGGGGCUCCAGCUC   1   *||||||||||||||*||||||| targets:487   GACCACUCGACCCCGUGGUCGAG   509 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
EF183005.1	ncRNA:23   GUGGUGAGCUGGGGCUCCAGCUC   1   *=*|||||||||=|||||||||| targets:1862   AGGCACUCGACCUCGAGGUCGAG   1884 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence	NA	coding protein	psRNATarget