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BaseInfo

ncRNA ID novel_bra_miR604
Species Brassica rapa
Class miRNA
Genome position ChrA9:15464211-15464363 [+]
Reference genome Brapa_1.0
Source SRR1776880;SRR1776889;SRR1776899;SRR1777714
Length 24
Mature sequence(if miRNA) 130 - ACUGGAUUUUUAGUUGAGGGUUUU - 153
Stem-loop(if miRNA) --                   U                    UAGUUC            G       C   UAAA
  AACCCUCAACUAAAAAUCC GUGAAAUAAACCCUCAACUU      CGUUAACAUAUG UACCCUC GUC    A
  ||||||||||||||||||| ||||||||||||||||||||      |||||||||||| ||||||| |||    A
  UUGGGAGUUGAUUUUUAGG CACUUUAUUUGGGAGUUGAA      GCAAUUGUAUAC GUGGGAG CAG    A
UU                   U                    UAUUUA            A       A   UGCC
Stem-loop sequence AACCCUCAACUAAAAAUCCUGUGAAAUAAACCCUCAACUUUAGUUCCGUUAACAUAUGGUACCCUCCGUCUAAAAAACCGUGACAGAGGGUGACAUAUGUUAACGAUUUAUAAGUUGAGGGUUUAUUUCACUGGAUUUUUAGUUGAGGGUUUU