ncRNA ID | novel_bra_miR604 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA9:15464211-15464363 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1776880;SRR1776889;SRR1776899;SRR1777714 |
Length | 24 |
Mature sequence(if miRNA) | 130 - ACUGGAUUUUUAGUUGAGGGUUUU - 153 |
Stem-loop(if miRNA) |
--                   U                    UAGUUC            G       C   UAAA   AACCCUCAACUAAAAAUCC GUGAAAUAAACCCUCAACUU      CGUUAACAUAUG UACCCUC GUC    A   ||||||||||||||||||| ||||||||||||||||||||      |||||||||||| ||||||| |||    A   UUGGGAGUUGAUUUUUAGG CACUUUAUUUGGGAGUUGAA      GCAAUUGUAUAC GUGGGAG CAG    A UU                   U                    UAUUUA            A       A   UGCC |
Stem-loop sequence | AACCCUCAACUAAAAAUCCUGUGAAAUAAACCCUCAACUUUAGUUCCGUUAACAUAUGGUACCCUCCGUCUAAAAAACCGUGACAGAGGGUGACAUAUGUUAACGAUUUAUAAGUUGAGGGUUUAUUUCACUGGAUUUUUAGUUGAGGGUUUU |