ncRNA ID | novel_bra_miR603 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA1:5409391-5409525 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1776880 |
Length | 24 |
Mature sequence(if miRNA) | 112 - AACUAAUAGUUGACUGCGAGAAAU - 135 |
Stem-loop(if miRNA) |
--AA     A          A       AAAAC      G           CU   AA       AA     CUAAU GUUGACUGCG GAAAUUG     GAAAUA UCAACCGUUAA  GAU  AUGGAAA  U     ||||| |||||||||| |||||||     |||||| |||||||||||  |||  |||||||  A     GAUUA UAACUGACGU UUUUAAU     UUUUAU AGUUGGUAAUU  UUA  UGCCUUU  A GGUC     G          G       ACUAA      A           UU   AC       GU |
Stem-loop sequence | AACUAAUAGUUGACUGCGAGAAAUUGAAAACGAAAUAGUCAACCGUUAACUGAUAAAUGGAAAAAUAAUGUUUCCGUCAAUUUUUUAAUGGUUGAAUAUUUUAAUCAUAAUUUUGUGCAGUCAAUGAUUAGCUGG |