ncRNA ID | novel_bra_miR595 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA8:9143921-9144045 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1776880 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UGACCGAGUAGACCGAUAGUC - 21 |
Stem-loop(if miRNA) |
--                                 C                A  UC  C     CUAUCGGUCUACUUGGUCAGCGCUAGCUUCUUC UCACCGGACAGGCUAA CU  UG AGC   ||||||||||||||||||||||||||||||||| |||||||||||||||| ||  || ||U   GAUAGCCAGAUGAGCCAGUCGCGAUCGAAGAAG AGUGGCCUGUCUGAUU GA  AC UCU CU                                 U                A  UC  C   |
Stem-loop sequence | CUAUCGGUCUACUUGGUCAGCGCUAGCUUCUUCCUCACCGGACAGGCUAAACUUCUGCAGCUUCUCCACUAGAUUAGUCUGUCCGGUGAUGAAGAAGCUAGCGCUGACCGAGUAGACCGAUAGUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009104953.2 |
|
3.0 | PREDICTED: Brassica rapa auxin efflux carrier component 7 (LOC103829294), mRNA | auxin efflux carrier component 7(LOC103829294) | coding protein | psRNATarget |