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BaseInfo

ncRNA ID novel_bra_miR590
Species Brassica rapa
Class miRNA
Genome position ChrA7:6310523-6310582 [-]
Reference genome Brapa_1.0
Source SRR1776880
Length 24
Mature sequence(if miRNA) 37 - AAAUAUUGUUGAAACAGGAGGGCA - 60
Stem-loop(if miRNA) --A                    G ACCUC
   AAUAUUGUUGAAACAGGAGG C     A
   |||||||||||||||||||| |
   UUAUGAUAAUUUUGUCUUCC G     A
CAG                    G AAAAA
Stem-loop sequence AAAUAUUGUUGAAACAGGAGGGCACCUCAAAAAAAGGCCUUCUGUUUUAAUAGUAUUGAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_009142901.1
ncRNA:24   ACGGGAGGACAAAGUUGUUAUAAA   1
  |||=-|||||*||||||||*||||
targets:172   UGCU-UCCUGGUUCAACAACAUUU   194

2.5 PREDICTED: Brassica rapa uncharacterized LOC103865123 (LOC103865123), mRNA uncharacterized LOC103865123(LOC103865123) coding protein psRNATarget