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BaseInfo

ncRNA ID novel_bra_miR588
Species Brassica rapa
Class miRNA
Genome position ChrA7:1933926-1933978 [+]
Reference genome Brapa_1.0
Source SRR1776880
Length 20
Mature sequence(if miRNA) 34 - GUAGCGACCGAGCGGAACGA - 53
Stem-loop(if miRNA) ---GAA             G UUC   U
      CGCUCGGUCGCUA C   GGC C
      ||||||||||||| |   |||
      GCGAGCCAGCGAU G   UCG G
AGCAAG             G --C   A
Stem-loop sequence GAACGCUCGGUCGCUAGCUUCGGCUCGAGCUCGGUAGCGACCGAGCGGAACGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_009126102.1
ncRNA:20   AGCAAGGCGAGCCAGCGAUG   1
  ||||*||||||||||||||=
targets:538   UCGUCCCGCUCGGUCGCUAU   557

2.0 PREDICTED: Brassica rapa uncharacterized LOC103849316 (LOC103849316), mRNA uncharacterized LOC103849316(LOC103849316) coding protein psRNATarget