ncRNA ID | novel_bra_miR588 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA7:1933926-1933978 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1776880 |
Length | 20 |
Mature sequence(if miRNA) | 34 - GUAGCGACCGAGCGGAACGA - 53 |
Stem-loop(if miRNA) |
---GAA             G UUC   U       CGCUCGGUCGCUA C   GGC C       ||||||||||||| |   |||       GCGAGCCAGCGAU G   UCG G AGCAAG             G --C   A |
Stem-loop sequence | GAACGCUCGGUCGCUAGCUUCGGCUCGAGCUCGGUAGCGACCGAGCGGAACGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009126102.1 |
|
2.0 | PREDICTED: Brassica rapa uncharacterized LOC103849316 (LOC103849316), mRNA | uncharacterized LOC103849316(LOC103849316) | coding protein | psRNATarget |