ncRNA ID | novel_bra_miR581 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA6:17027194-17027249 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1776880 |
Length | 24 |
Mature sequence(if miRNA) | 33 - AGAGGAAAAAAUGGAGUAGGGAUG - 56 |
Stem-loop(if miRNA) |
--            A  CA       UC   UUCUUACUCCAU UU  CUUUUAA  C   |||||||||||| ||  |||||||   AGGGAUGAGGUA AA  GGAGAUU  A GU            A  AA       UU |
Stem-loop sequence | UUCUUACUCCAUAUUCACUUUUAAUCCAUUUUAGAGGAAAAAAUGGAGUAGGGAUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009133654.2 |
|
2.5 | PREDICTED: Brassica rapa serine carboxypeptidase-like 47 (LOC103856543), mRNA | serine carboxypeptidase-like 47(LOC103856543) | coding protein | psRNATarget |