ncRNA ID | novel_bra_miR580 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA5:23911454-23911557 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1161445 |
Length | 21 |
Mature sequence(if miRNA) | 84 - ACCCGUCUCUUAAUUUUUAAC - 104 |
Stem-loop(if miRNA) |
--ACC              U         -     A   CA                 CGUCUCUUAAUUUU AACUAAAAA GCUAA AAC  AUUUUUAAAUAU      |||||||||||||| ||||||||| ||||| |||  |||||||||||C      GCAGAGAAUUAAAA UUGAUUUUU CGAUU UUG  UAAGAAUUUAUU CUUAA              U         U     C   AG            |
Stem-loop sequence | ACCCGUCUCUUAAUUUUUAACUAAAAAGCUAAAAACCAAUUUUUAAAUAUCUUAUUUAAGAAUGAGUUCUUAGCUUUUUUAGUUUAAAAUUAAGAGACGAAUUC |