ncRNA ID | novel_bra_miR571 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA8:2757049-2757104 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1125021 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AACAAAAAAUAAAAGGAUUACUCC - 24 |
Stem-loop(if miRNA) |
--               G       CAU   AACAAAAAAUAAAAG AUUACUC   U   ||||||||||||||| |||||||   UUGUUUUUUAUUUUC UAAUGAG   U AC               G       AUA |
Stem-loop sequence | AACAAAAAAUAAAAGGAUUACUCCAUUUAUAGAGUAAUGCUUUUAUUUUUUGUUCA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009146996.2 |
|
3.0 | PREDICTED: Brassica rapa CBL-interacting serine/threonine-protein kinase 7 (LOC103868949), mRNA | CBL-interacting serine/threonine-protein kinase 7(LOC103868949) | coding protein | psRNATarget |