ncRNA ID | novel_bra_miR567 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA5:19622702-19622756 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1161445;SRR1160826 |
Length | 24 |
Mature sequence(if miRNA) | 32 - AGCCUGGCUCUGAUACCAUGAAGU - 55 |
Stem-loop(if miRNA) |
--UA          A     U           CGUGGUAUCA AGCCA GUUAUCA     |||||||||| ||||| ||||||U     GUACCAUAGU UCGGU CGAUAGU UGAA          C     C       |
Stem-loop sequence | UACGUGGUAUCAAAGCCAUGUUAUCAUUGAUAGCCUGGCUCUGAUACCAUGAAGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_009125894.1 |
|
1.5 | PREDICTED: Brassica rapa uncharacterized LOC103849074 (LOC103849074), mRNA | uncharacterized LOC103849074(LOC103849074) | coding protein | psRNATarget | |||||||||
XM_009141618.2 |
|
2.5 | PREDICTED: Brassica rapa uncharacterized LOC103863824 (LOC103863824), mRNA | uncharacterized LOC103863824(LOC103863824) | coding protein | psRNATarget |