ncRNA ID | novel_bra_miR557 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA9:32846376-32846523 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1776877;SRR1777714 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CUCUACUAUAGAGUGAACCAUUGG - 24 |
Stem-loop(if miRNA) |
--                                                    U           C      U   AAUGGUUCACUCUAUAGUAGAGUUACUCUAUAAUAGAGUGAAAUAUAGAGUA UCUUGUUUUUU ACUCUA A   |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||   UUACCAAGUGAGAUAUCAUCUCAAUGAGAUAUUAUCUCACUUUAUAUCUCAU AGAAUAAAAAA UGAGGU U GG                                                    U           A      U |
Stem-loop sequence | AAUGGUUCACUCUAUAGUAGAGUUACUCUAUAAUAGAGUGAAAUAUAGAGUAUUCUUGUUUUUUCACUCUAUAUUUGGAGUAAAAAAAUAAGAUUACUCUAUAUUUCACUCUAUUAUAGAGUAACUCUACUAUAGAGUGAACCAUUGG |