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BaseInfo

ncRNA ID novel_bra_miR557
Species Brassica rapa
Class miRNA
Genome position ChrA9:32846376-32846523 [-]
Reference genome Brapa_1.0
Source SRR1776877;SRR1777714
Length 24
Mature sequence(if miRNA) 1 - CUCUACUAUAGAGUGAACCAUUGG - 24
Stem-loop(if miRNA) --                                                    U           C      U
  AAUGGUUCACUCUAUAGUAGAGUUACUCUAUAAUAGAGUGAAAUAUAGAGUA UCUUGUUUUUU ACUCUA A
  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
  UUACCAAGUGAGAUAUCAUCUCAAUGAGAUAUUAUCUCACUUUAUAUCUCAU AGAAUAAAAAA UGAGGU U
GG                                                    U           A      U
Stem-loop sequence AAUGGUUCACUCUAUAGUAGAGUUACUCUAUAAUAGAGUGAAAUAUAGAGUAUUCUUGUUUUUUCACUCUAUAUUUGGAGUAAAAAAAUAAGAUUACUCUAUAUUUCACUCUAUUAUAGAGUAACUCUACUAUAGAGUGAACCAUUGG