| ncRNA ID | novel_bra_miR555 |
| Species | Brassica rapa |
| Class | miRNA |
| Genome position | ChrA9:32618389-32618498 [+] |
| Reference genome | Brapa_1.0 |
| Source | SRR1776877 |
| Length | 20 |
| Mature sequence(if miRNA) | 91 - GGCAGUCUCCUCGGCUAUUC - 110 |
| Stem-loop(if miRNA) |
-- A U U CGU -UA UCUC AAUAA GUAGCC AGGA GACU GCCUG CU AACCA UAUCAAAGACUA A |||||| |||| |||| ||||| || ||||| |||||||||||| UAUCGG UCCU CUGA CGGAU GA UUGGU AUAGUUUCUGAU G CU C - - --U UAA -UAA AGCUA |
| Stem-loop sequence | GUAGCCAAGGAUGACUUGCCUGCGUCUUAAACCAUCUCUAUCAAAGACUAAAUAAAGAUCGAUAGUCUUUGAUAAAUUGGUUAAUAGUUAGGCAGUCUCCUCGGCUAUUC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| XM_009114310.2 |
|
3.0 | PREDICTED: Brassica rapa probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 (LOC103837918), mRNA | probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11(LOC103837918) | coding protein | psRNATarget |