ncRNA ID | novel_bra_miR549 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA1:2171150-2171330 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1776877 |
Length | 25 |
Mature sequence(if miRNA) | 1 - UAAUUGUGGGCUUAAAGCAUAUUGA - 25 |
Stem-loop(if miRNA) |
--             GG    C         GC A   A               -----U                          ------   G   AAUAUGUUUUAAG  CACA UUAUCAUAA  C AAA UCAGAUAAUUAAUUG      AAACUAUGCAUUGUUUAUAAUUAAAG      ACA U   |||||||||||||  |||| |||||||||  | ||| |||||||||||||||      ||||||||||||||||||||||||||      |||   UUAUACGAAAUUC  GUGU AAUAGUAUU  G UUU AGUCUAUUGAUUAAC      UUUGAUACGUAACAAAUAUUGAUUUU      UGU G AG             GG    U         AA C   A               UGAUAU                          ACCUUA   A |
Stem-loop sequence | AAUAUGUUUUAAGGGCACACUUAUCAUAAGCCAAAAAUCAGAUAAUUAAUUGUAAACUAUGCAUUGUUUAUAAUUAAAGACAGUGAUGUAUUCCAUUUUAGUUAUAAACAAUGCAUAGUUUUAUAGUCAAUUAGUUAUCUGAAUUUCGAAUUAUGAUAAUUGUGGGCUUAAAGCAUAUUGA |