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BaseInfo

ncRNA ID novel_bra_miR544
Species Brassica rapa
Class miRNA
Genome position ChrA8:18100000-18100151 [-]
Reference genome Brapa_1.0
Source SRR1776877;SRR1776880;SRR1776889;SRR1776899;SRR1777714
Length 23
Mature sequence(if miRNA) 1 - AUUAUGGAAUGGGGUUGGAGAUA - 23
Stem-loop(if miRNA) --      U               U   U     AUA     A        A  UAAACAA          C      U
  UCUCUA CUCCAUUUCAUAAUU ACU CAAAA   GAGUG AAAAUAGA UA       AAAAAAAAAU ACUCUA U
  |||||| ||||||||||||||| ||| |||||   ||||| |||||||| ||       |||||||||| ||||||
  AGAGGU GGGGUAAGGUAUUAA UGA GUUUU   UUCAU UUUUAUCU AU       UUUUUUUUUA UGAGAU U
AU      U               -   C     -AC     C        C  ----UAC          A      A
Stem-loop sequence UCUCUAUCUCCAUUUCAUAAUUUACUUCAAAAAUAGAGUGAAAAAUAGAAUAUAAACAAAAAAAAAAAUCACUCUAUUUAUAGAGUAAUUUUUUUUUCAUUACUCUAUUUUCUACUUCAUUUUGCAGUAAUUAUGGAAUGGGGUUGGAGAUA