ncRNA ID | novel_bra_miR542 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA8:6207075-6207200 [+] |
Reference genome | Brapa_1.0 |
Source | SRR1776877;SRR1776889 |
Length | 23 |
Mature sequence(if miRNA) | 104 - UUACAAGUAAGUCGUCUGGUUUA - 126 |
Stem-loop(if miRNA) |
--AAA            A           CA  A      AA     GA CGGAAAAUUAAAU      CAGACGACUUAC UGUAAGUCGUC  GA GAGUUU  UAUUU  G             A      |||||||||||| |||||||||||  || ||||||  |||||  |             U      GUCUGCUGAAUG ACAUUCAGCAG  CU UUCAGA  AUAAA  C             U AUUUG            A           AC  -      AG     AU AAAGGGCGAUUUU |
Stem-loop sequence | AAACAGACGACUUACAUGUAAGUCGUCCAGAAGAGUUUAAUAUUUGAGCGGAAAAUUAAAUAUUUUUUAGCGGGAAACUAAAAUAGAAGACUUUCCAGACGACUUACAAGUAAGUCGUCUGGUUUA |