ncRNA ID | novel_bra_miR540 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA7:19114251-19114339 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1776877;SRR1776880;SRR1485274 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AGCUAUGAGAUCAAAGGGUUG - 21 |
Stem-loop(if miRNA) |
--                     G   AAAAGGAAGA  A   -  U   ACCCUUUGAUCUCAUAGCUCA AGA          AG UGG CG U   ||||||||||||||||||||| |||          || ||| ||   UGGGAAACUAGAGUAUCGAGU UCU          UC ACC GU U GU                     G   ---GAAGGCG  -   A  G |
Stem-loop sequence | ACCCUUUGAUCUCAUAGCUCAGAGAAAAAGGAAGAAGAUGGCGUUUGUGACCACUGCGGAAGUCUGUGAGCUAUGAGAUCAAAGGGUUG |