Search result

BaseInfo

ncRNA ID novel_bra_miR540
Species Brassica rapa
Class miRNA
Genome position ChrA7:19114251-19114339 [-]
Reference genome Brapa_1.0
Source SRR1776877;SRR1776880;SRR1485274
Length 21
Mature sequence(if miRNA) 1 - AGCUAUGAGAUCAAAGGGUUG - 21
Stem-loop(if miRNA) --                     G   AAAAGGAAGA  A   -  U
  ACCCUUUGAUCUCAUAGCUCA AGA          AG UGG CG U
  ||||||||||||||||||||| |||          || ||| ||
  UGGGAAACUAGAGUAUCGAGU UCU          UC ACC GU U
GU                     G   ---GAAGGCG  -   A  G
Stem-loop sequence ACCCUUUGAUCUCAUAGCUCAGAGAAAAAGGAAGAAGAUGGCGUUUGUGACCACUGCGGAAGUCUGUGAGCUAUGAGAUCAAAGGGUUG