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BaseInfo

ncRNA ID	novel_bra_miR538
Species	Brassica rapa
Class	miRNA
Genome position	ChrA7:4018959-4019076 [+]
Reference genome	Brapa_1.0
Source	SRR1776877;SRR1777714
Length	24
Mature sequence(if miRNA)	1 - UUGAGAAAAUGGAGUGGGAAAUGG - 24
Stem-loop(if miRNA)	--                                        A     G       CAU   UUGAGAAAAUGGAGUGGGAAAUGGGGUAAUGAACAAAAAA AAAAG AUUACUU   U   |||||||||||||||||||||||||||||||||||||||| ||||| |||||||   AACUCUUUUACCUCACCCUUUACCCCAUUACUUGUUUUUU UUUUC UGAUGAG   U UU                                        A     G       AUA
Stem-loop sequence	UUGAGAAAAUGGAGUGGGAAAUGGGGUAAUGAACAAAAAAAAAAAGGAUUACUUCAUUUAUAGAGUAGUGCUUUUAUUUUUUGUUCAUUACCCCAUUUCCCACUCCAUUUUCUCAAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_009130856.2	ncRNA:24   GGUA--------AAGGGUGAGGUAAAAGAGUU   1   |=||--------|||*||=||||||||||||* targets:40   CUAUCUCUCUCCUUCACAUUCCAUUUUCUCAC   71 Target Full Sequence	3.0	PREDICTED: Brassica rapa expansin-A15 (LOC103853964), mRNA	expansin-A15(LOC103853964)	coding protein	psRNATarget