ncRNA ID | novel_bra_miR537 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA6:9258491-9258611 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1776877 |
Length | 24 |
Mature sequence(if miRNA) | 98 - AUAAUGGAGGGGUUGGGGUCGGUG - 121 |
Stem-loop(if miRNA) |
--                  U               C  UG     GGG    --AC     A   AUAAUGGAGGGGUUGGGG CGGUGCGCUGCAGCG UG  AGCUU   GCCC    GGGGC G   |||||||||||||||||| ||||||||||||||| ||  |||||   ||||    ||||| G   UAUUACCUCCCUAACCCC GCCACGCGACGUCGC AC  UUGGG   CGGG    CCUUG U AG                  U               -  UG     ---    GGAC     A |
Stem-loop sequence | AUAAUGGAGGGGUUGGGGUCGGUGCGCUGCAGCGCUGUGAGCUUGGGGCCCACGGGGCAGGUAGUUCCCAGGGGGCGGGUUGUCACGCUGCAGCGCACCGUCCCCAAUCCCUCCAUUAUGA |