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BaseInfo

ncRNA ID novel_bra_miR537
Species Brassica rapa
Class miRNA
Genome position ChrA6:9258491-9258611 [-]
Reference genome Brapa_1.0
Source SRR1776877
Length 24
Mature sequence(if miRNA) 98 - AUAAUGGAGGGGUUGGGGUCGGUG - 121
Stem-loop(if miRNA) --                  U               C  UG     GGG    --AC     A
  AUAAUGGAGGGGUUGGGG CGGUGCGCUGCAGCG UG  AGCUU   GCCC    GGGGC G
  |||||||||||||||||| ||||||||||||||| ||  |||||   ||||    ||||| G
  UAUUACCUCCCUAACCCC GCCACGCGACGUCGC AC  UUGGG   CGGG    CCUUG U
AG                  U               -  UG     ---    GGAC     A
Stem-loop sequence AUAAUGGAGGGGUUGGGGUCGGUGCGCUGCAGCGCUGUGAGCUUGGGGCCCACGGGGCAGGUAGUUCCCAGGGGGCGGGUUGUCACGCUGCAGCGCACCGUCCCCAAUCCCUCCAUUAUGA