ncRNA ID | novel_bra_miR536 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA6:24620144-24620327 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1776877 |
Length | 23 |
Mature sequence(if miRNA) | 1 - AGUGAACCAUUAGAGCAAAUUCA - 23 |
Stem-loop(if miRNA) |
--         A   U     G  UCUC         G   C         G   U       A         -A               AUAG   GAUUUGUUC AAU GUUCA UU    UAUAAUAGA UUA UUUGUAAUA AGU AAAUAUA AGUAAUGUU  UUUUUUUACUCUAUA    A   ||||||||| ||| ||||| ||    ||||||||| ||| ||||||||| ||| ||||||| |||||||||  |||||||||||||||    G   UUAAACGAG UUA CAAGU AA    AUAUUAUCU AAU AGAUAUUAU UCA UUUAUAU UUAUUACAA  AAAAAAAUGAGGUAU    U AC         A   C     G  ----         A   A         A   C       C         CA               AAAA |
Stem-loop sequence | GAUUUGUUCAAAUUGUUCAGUUUCUCUAUAAUAGAGUUACUUUGUAAUAGAGUUAAAUAUAAAGUAAUGUUAUUUUUUUACUCUAUAAUAGAGUAAAAUAUGGAGUAAAAAAAACAACAUUAUUCUAUAUUUCACUAUAUUAUAGAAUAAAUCUAUUAUAAAGUGAACCAUUAGAGCAAAUUCA |