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BaseInfo

ncRNA ID novel_bra_miR535
Species Brassica rapa
Class miRNA
Genome position ChrA5:14135066-14135213 [-]
Reference genome Brapa_1.0
Source SRR1776877
Length 23
Mature sequence(if miRNA) 1 - GUAGCGACCGAGCUGUGUGCAUA - 23
Stem-loop(if miRNA) --    UG -        A             A       UU        G           G          - U
  UGCA  U GCUCGGUC CUACGUAGUGACC AGCUUGG  CCAAGCUC AUCGCUAUGUA CGACCGAGCA G A
  ||||  | |||||||| ||||||||||||| |||||||  |||||||| ||||||||||| |||||||||| |
  ACGU  G CGAGCCAG GAUGCAUCGCUGG UCGAGCU  GGUUCGAG UAGCGAUGCAU GCUGGUUCGU C C
AU    GU U        C             C       -C        A           -          G G
Stem-loop sequence UGCAUGUGCUCGGUCACUACGUAGUGACCAAGCUUGGUUCCAAGCUCGAUCGCUAUGUAGCGACCGAGCAGUACGCGUGCUUGGUCGUACGUAGCGAUAGAGCUUGGCUCGAGCUCGGUCGCUACGUAGCGACCGAGCUGUGUGCAUA