ncRNA ID | novel_bra_miR535 |
Species | Brassica rapa |
Class | miRNA |
Genome position | ChrA5:14135066-14135213 [-] |
Reference genome | Brapa_1.0 |
Source | SRR1776877 |
Length | 23 |
Mature sequence(if miRNA) | 1 - GUAGCGACCGAGCUGUGUGCAUA - 23 |
Stem-loop(if miRNA) |
--    UG -        A             A       UU        G           G          - U   UGCA  U GCUCGGUC CUACGUAGUGACC AGCUUGG  CCAAGCUC AUCGCUAUGUA CGACCGAGCA G A   ||||  | |||||||| ||||||||||||| |||||||  |||||||| ||||||||||| |||||||||| |   ACGU  G CGAGCCAG GAUGCAUCGCUGG UCGAGCU  GGUUCGAG UAGCGAUGCAU GCUGGUUCGU C C AU    GU U        C             C       -C        A           -          G G |
Stem-loop sequence | UGCAUGUGCUCGGUCACUACGUAGUGACCAAGCUUGGUUCCAAGCUCGAUCGCUAUGUAGCGACCGAGCAGUACGCGUGCUUGGUCGUACGUAGCGAUAGAGCUUGGCUCGAGCUCGGUCGCUACGUAGCGACCGAGCUGUGUGCAUA |